Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_1755.8688.g
View in Genome Browser
Position
scaffold1755:139797-143356 (+)
3559bp
Gene Type
gene
Gene Description (Protein Product)
cyclic nucleotide-gated ion channel
Organism
Populus pruinosa
Also AS Potri.017G089900AT5G15410Potri.017G089900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_2457.14586.g Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Ppr_47942.22447.g LRR receptor-like serine threonine-protein kinase
Ppr_706.30039.g LRR receptor-like serine threonine-protein kinase
Regulatory gene
Ppr_10661.565.g Truncated transcription factor CAULIFLOWER
Ppr_11046.812.g Dof zinc finger protein
Ppr_11896.1284.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0002376 immune system process BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005216 monoatomic ion channel activity MF
GO:0005217 intracellular ligand-gated monoatomic ion channel activity MF
GO:0005221 intracellular cyclic nucleotide activated monoatomic cation channel activity MF
GO:0005222 intracellular cAMP-activated cation channel activity MF
GO:0005242 inward rectifier potassium channel activity MF
GO:0005244 voltage-gated monoatomic ion channel activity MF
GO:0005249 voltage-gated potassium channel activity MF
GO:0005261 monoatomic cation channel activity MF
GO:0005262 calcium channel activity MF
GO:0005267 potassium channel activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005516 calmodulin binding MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005887 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006813 potassium ion transport BP
GO:0006816 calcium ion transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007263 nitric oxide mediated signal transduction BP
GO:0008150 biological_process BP
GO:0008219 cell death BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009626 plant-type hypersensitive response BP
GO:0009987 cellular process BP
GO:0012501 programmed cell death BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015077 inorganic cation transmembrane transporter activity MF
GO:0015079 potassium ion transmembrane transporter activity MF
GO:0015085 calcium ion transmembrane transporter activity MF
GO:0015267 channel activity MF
GO:0015276 ligand-gated monoatomic ion channel activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015672 inorganic cation transmembrane transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0019932 second-messenger-mediated signaling BP
GO:0022803 passive transmembrane transporter activity MF
GO:0022832 voltage-gated channel activity MF
GO:0022834 ligand-gated channel activity MF
GO:0022836 gated channel activity MF
GO:0022838 channel activity MF
GO:0022839 monoatomic ion gated channel activity MF
GO:0022843 voltage-gated monoatomic cation channel activity MF
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0023052 signaling BP
GO:0030001 metal ion transport BP
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0033554 cellular response to stress BP
GO:0034050 programmed cell death induced by symbiont BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0035556 intracellular signal transduction BP
GO:0042391 regulation of membrane potential BP
GO:0043855 cyclic nucleotide-gated monoatomic ion channel activity MF
GO:0044425 obsolete membrane part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0046873 metal ion transmembrane transporter activity MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051716 cellular response to stimulus BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070509 calcium ion import BP
GO:0070588 calcium ion transmembrane transport BP
GO:0070838 metal ion transport BP
GO:0071804 potassium ion transport BP
GO:0071805 potassium ion transmembrane transport BP
GO:0071944 cell periphery CC
GO:0072511 inorganic cation transmembrane transport BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0099094 ligand-gated monoatomic cation channel activity MF
KEGG Term Name Description
map04626 Plant-pathogen interaction Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.