PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Ppr_241.13969.g View in Genome Browser
Position	scaffold241:2906546-2908037 (+) 1491bp
Gene Type	gene
Gene Description (Protein Product)	Protein of unknown function (DUF563)
Organism	Populus pruinosa
Also AS	Potri.010G162200AT2G03360Potri.010G162200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Ppr_32.17327.g UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC Ppr_5216.23078.g UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase Ppr_779.31728.g Protein of unknown function (DUF563)
Regulatory gene	Ppr_1570.6985.g Tesmin/TSO1-like CXC domain Ppr_2264.12291.g Tesmin/TSO1-like CXC domain Ppr_380.19192.g tesmin TSO1-like CXC

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map00514	Other types of O-glycan biosynthesis	O-mannosyl glycans are a type of O-glycans that are found both in eukaryotes and prokaryotes. Biosynthesis of O-mannosyl glycans is initiated by the transfer of mannose from Man-P-Dol to serine or threonine residue, which is catalyzed by protein O-mannosyltransferases POMT1 and POMT2. Defects of these genes are linked to human diseases, such as muscular dystrophies caused by reduced O-mannosylation of alpha-dystroglycan in skeletal muscles [DS:H00120].