Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_3494.18697.g
View in Genome Browser
Position
scaffold3494:353199-363031 (-)
9832bp
Gene Type
gene
Gene Description (Protein Product)
WD and tetratricopeptide repeats protein
Organism
Populus pruinosa
Also AS Potri.005G158300AT5G10940Potri.005G158300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_641.26410.g Denticleless protein homolog
Ppr_6355.26257.g WD-40 repeat-containing protein
Ppr_706.29919.g WD domain, G-beta repeat
Regulatory gene
Ppr_1043.374.g zinc finger
Ppr_11046.812.g Dof zinc finger protein
Ppr_1179.1201.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0019538 protein metabolic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043687 post-translational protein modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP