Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_380.19390.g
View in Genome Browser
Position
scaffold380:2632357-2642263 (-)
9906bp
Gene Type
gene
Gene Description (Protein Product)
Encoded by
Organism
Populus pruinosa
Also AS Potri.018G102100AT4G30860Potri.018G102100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_6129.25908.g PHD finger protein ALFIN-LIKE
Ppr_7285.30162.g PHD finger protein ALFIN-LIKE
Ppr_572.24903.g DNA (cytosine-5)-methyltransferase
Regulatory gene
Ppr_1.10561.g Transcription factor
Ppr_10365.259.g B3 DNA binding domain
Ppr_10365.260.g B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000785 chromatin CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00310 Lysine degradation -