Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_422.20384.g
View in Genome Browser
Position
scaffold422:1006270-1007045 (+)
775bp
Gene Type
gene
Gene Description (Protein Product)
LOB domain-containing protein
Organism
Populus pruinosa
Also AS Potri.002G041100AT3G58190Potri.002G041100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_47942.22561.g phosphatase 2c
Ppr_442.21855.g SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
Ppr_422.20745.g SWI SNF complex subunit
Regulatory gene
Ppr_1.10561.g Transcription factor
Ppr_10365.259.g B3 DNA binding domain
Ppr_10365.260.g B3 DNA binding domain
Target gene
Ppr_1.10533.g ATP-citrate synthase alpha chain protein
Ppr_102.209.g Belongs to the glycosyl hydrolase 5 (cellulase A) family
Ppr_10347.253.g

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009791 post-embryonic development BP
GO:0010015 root morphogenesis BP
GO:0010101 post-embryonic root morphogenesis BP
GO:0010102 lateral root morphogenesis BP
GO:0010311 lateral root formation BP
GO:0022622 root system development BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0048364 root development BP
GO:0048527 lateral root development BP
GO:0048528 post-embryonic root development BP
GO:0048646 anatomical structure formation involved in morphogenesis BP
GO:0048731 system development BP
GO:0048830 adventitious root development BP
GO:0048856 anatomical structure development BP
GO:0090696 post-embryonic plant organ development BP
GO:0090697 post-embryonic plant organ morphogenesis BP
GO:0090698 post-embryonic plant morphogenesis BP
GO:0099402 plant organ development BP
GO:1905392 plant organ morphogenesis BP
GO:1905393 plant organ formation BP