Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_422.20814.g
View in Genome Browser
Position
scaffold422:4844817-4846790 (-)
1973bp
Gene Type
gene
Gene Description (Protein Product)
Vacuolar protein sorting-associated protein
Organism
Populus pruinosa
Also AS Potri.005G171500AT3G19770Potri.005G171500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_674.28418.g Ras-related protein
Ppr_47942.22448.g Ras-related protein
Ppr_4828.22763.g Belongs to the nucleosome assembly protein (NAP) family
Regulatory gene
Ppr_22.13057.g Protein BASIC PENTACYSTEINE6-like
Ppr_224.12056.g GAGA binding protein-like family
Ppr_224.12058.g GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000278 mitotic cell cycle BP
GO:0000281 mitotic cytokinesis BP
GO:0000910 cytokinesis BP
GO:0000911 cytokinesis by cell plate formation BP
GO:0000919 cell plate assembly BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0005088 guanyl-nucleotide exchange factor activity MF
GO:0005089 guanyl-nucleotide exchange factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0017016 small GTPase binding MF
GO:0017048 small GTPase binding MF
GO:0019899 enzyme binding MF
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0022622 root system development BP
GO:0031267 small GTPase binding MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032506 cytokinetic process BP
GO:0042546 cell wall biogenesis BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044085 cellular component biogenesis BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048364 root development BP
GO:0048528 post-embryonic root development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051020 GTPase binding MF
GO:0051301 cell division BP
GO:0061458 reproductive system development BP
GO:0061640 cytoskeleton-dependent cytokinesis BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0071554 cell wall organization or biogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090696 post-embryonic plant organ development BP
GO:0098772 molecular function regulator activity MF
GO:0099402 plant organ development BP
GO:1902410 mitotic cytokinetic process BP
GO:1903047 mitotic cell cycle process BP