Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_422.20921.g
View in Genome Browser
Position
scaffold422:5890509-5892082 (-)
1573bp
Gene Type
gene
Gene Description (Protein Product)
Zinc-finger homeodomain protein
Organism
Populus pruinosa
Also AS Potri.002G102900AT4G24660Potri.002G102900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_913.34296.g Phosducin-like protein 3
Ppr_779.32532.g Regulator of G-protein signaling
Ppr_572.24576.g Rae1-like protein
Regulatory gene
Ppr_10661.565.g Truncated transcription factor CAULIFLOWER
Ppr_11046.812.g Dof zinc finger protein
Ppr_11896.1284.g ZINC FINGER protein
Target gene
Ppr_1.10528.g Catalyzes the rate-limiting step of the oxidative pentose-phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis
Ppr_1.10533.g ATP-citrate synthase alpha chain protein
Ppr_1.10534.g -

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0010154 fruit development BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046983 protein dimerization activity MF
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF