Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_422.21253.g
View in Genome Browser
Position
scaffold422:9482457-9487384 (+)
4927bp
Gene Type
gene
Gene Description (Protein Product)
3-phosphoshikimate 1-carboxyvinyltransferase
Organism
Populus pruinosa
Also AS Potri.002G146400AT2G45300Potri.002G146400.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_771.31021.g Shikimate kinase
Ppr_674.28381.g Chorismate synthase
Ppr_741.30555.g LSD1 zinc finger
Regulatory gene
Ppr_1.10561.g Transcription factor
Ppr_1043.340.g Myb-related protein
Ppr_1043.468.g Myb-related protein 308-like

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00400 Phenylalanine, tyrosine and tryptophan biosynthesis -