Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_572.24500.g
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Position
scaffold572:2335457-2338364 (+)
2907bp
Gene Type
gene
Gene Description (Protein Product)
Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family
Organism
Populus pruinosa
Also AS Potri.001G056200AT1G27950Potri.001G056200.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_5911.25449.g Long chain acyl-CoA synthetase
Ppr_672.28063.g Long chain acyl-CoA synthetase
Ppr_706.29557.g Isoflavone reductase homolog
Regulatory gene
Ppr_10365.259.g B3 DNA binding domain
Ppr_10365.260.g B3 DNA binding domain
Ppr_10365.261.g B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006869 lipid transport BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008289 lipid binding MF
GO:0009505 plant-type cell wall CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0010876 lipid localization BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0030312 external encapsulating structure CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031225 obsolete anchored component of membrane CC
GO:0031226 obsolete intrinsic component of plasma membrane CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033036 macromolecule localization BP
GO:0042335 cuticle development BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0046658 obsolete anchored component of plasma membrane CC
GO:0048856 anatomical structure development BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0071702 organic substance transport BP
GO:0071944 cell periphery CC
GO:0098542 defense response to other organism BP