Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_6429.26539.g
View in Genome Browser
Position
scaffold6429:363483-366465 (+)
2982bp
Gene Type
gene
Gene Description (Protein Product)
Calmodulin-binding protein
Organism
Populus pruinosa
Also AS Potri.013G010700AT4G25800Potri.013G010700.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_779.31785.g calmodulin-binding transcription activator
Ppr_771.31110.g Calmodulin-binding transcription activator
Ppr_774.31502.g Calmodulin-binding transcription activator
Regulatory gene
Ppr_10661.565.g Truncated transcription factor CAULIFLOWER
Ppr_11046.812.g Dof zinc finger protein
Ppr_11896.1284.g ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001666 response to hypoxia BP
GO:0002229 defense response to oomycetes BP
GO:0002237 response to molecule of bacterial origin BP
GO:0002239 response to oomycetes BP
GO:0002376 immune system process BP
GO:0002682 regulation of immune system process BP
GO:0002831 regulation of response to biotic stimulus BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005516 calmodulin binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006082 organic acid metabolic process BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009628 response to abiotic stimulus BP
GO:0009696 salicylic acid metabolic process BP
GO:0009697 salicylic acid biosynthetic process BP
GO:0009787 regulation of abscisic acid-activated signaling pathway BP
GO:0009789 positive regulation of abscisic acid-activated signaling pathway BP
GO:0009814 defense response to other organism BP
GO:0009816 defense response to bacterium BP
GO:0009889 regulation of biosynthetic process BP
GO:0009966 regulation of signal transduction BP
GO:0009967 positive regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010112 regulation of systemic acquired resistance BP
GO:0010224 response to UV-B BP
GO:0010337 regulation of salicylic acid metabolic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010565 regulation of cellular ketone metabolic process BP
GO:0010646 regulation of cell communication BP
GO:0010647 positive regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0016053 organic acid biosynthetic process BP
GO:0016999 antibiotic metabolic process BP
GO:0017000 antibiotic biosynthetic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0018958 phenol-containing compound metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0023051 regulation of signaling BP
GO:0023056 positive regulation of signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031347 regulation of defense response BP
GO:0032101 regulation of response to external stimulus BP
GO:0032350 regulation of hormone metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0033554 cellular response to stress BP
GO:0036293 response to decreased oxygen levels BP
GO:0036294 cellular response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0042445 hormone metabolic process BP
GO:0042446 hormone biosynthetic process BP
GO:0042537 benzene-containing compound metabolic process BP
GO:0042742 defense response to bacterium BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0043565 sequence-specific DNA binding MF
GO:0043900 obsolete regulation of multi-organism process BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0045088 regulation of innate immune response BP
GO:0046189 phenol-containing compound biosynthetic process BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046885 regulation of hormone biosynthetic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050776 regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070482 response to oxygen levels BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071216 cellular response to biotic stimulus BP
GO:0071219 cellular response to molecule of bacterial origin BP
GO:0071453 cellular response to oxygen levels BP
GO:0071456 cellular response to hypoxia BP
GO:0071704 organic substance metabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0080142 regulation of salicylic acid biosynthetic process BP
GO:0097159 organic cyclic compound binding MF
GO:0098542 defense response to other organism BP
GO:0140110 transcription regulator activity MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901419 regulation of response to alcohol BP
GO:1901421 positive regulation of response to alcohol BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
GO:1902584 positive regulation of response to water deprivation BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905957 regulation of cellular response to alcohol BP
GO:1905959 positive regulation of cellular response to alcohol BP
GO:2000070 regulation of response to water deprivation BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP