Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_6607.26858.g
View in Genome Browser
Position
scaffold6607:258884-261512 (-)
2628bp
Gene Type
gene
Gene Description (Protein Product)
50S ribosomal protein L3-2
Organism
Populus pruinosa
Also AS Potri.010G002300AT3G17465Potri.010G002300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_7873.32627.g Belongs to the universal ribosomal protein uS17 family
Ppr_7362.30414.g 60S ribosomal Protein
Ppr_7775.31676.g Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Regulatory gene
Ppr_10661.565.g Truncated transcription factor CAULIFLOWER
Ppr_10800.666.g AP2-like ethylene-responsive transcription factor
Ppr_11046.812.g Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map03010 Ribosome -