PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Ppr_664.26979.g View in Genome Browser
Position	scaffold664:766225-769466 (-) 3241bp
Gene Type	gene
Gene Description (Protein Product)	Aldo/keto reductase family
Organism	Populus pruinosa
Also AS	Potri.015G006900AT5G53580Potri.015G006900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Ppr_7303.30208.g psbQ-like protein 2 Ppr_7203.30084.g Ribosomal protein S1-like RNA-binding domain Ppr_672.28077.g Cytochrome c biogenesis protein
Regulatory gene	Ppr_22.13057.g Protein BASIC PENTACYSTEINE6-like Ppr_224.12056.g GAGA binding protein-like family Ppr_224.12058.g GAGA binding protein-like family

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004033	aldo-keto reductase (NADP) activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006081	cellular aldehyde metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006766	vitamin metabolic process	BP
GO:0006767	water-soluble vitamin metabolic process	BP
GO:0006793	phosphorus metabolic process	BP
GO:0006796	phosphate-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009110	vitamin biosynthetic process	BP
GO:0009443	pyridoxal 5'-phosphate salvage	BP
GO:0009507	chloroplast	CC
GO:0009526	plastid envelope	CC
GO:0009532	plastid stroma	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009941	chloroplast envelope	CC
GO:0009987	cellular process	BP
GO:0010287	plastoglobule	CC
GO:0016020	membrane	CC
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0017144	xenobiotic metabolic process	BP
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019637	organophosphate metabolic process	BP
GO:0031967	organelle envelope	CC
GO:0031975	envelope	CC
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0036094	small molecule binding	MF
GO:0042364	water-soluble vitamin biosynthetic process	BP
GO:0042651	thylakoid membrane	CC
GO:0042816	vitamin B6 metabolic process	BP
GO:0042817	pyridoxal metabolic process	BP
GO:0042819	vitamin B6 biosynthetic process	BP
GO:0042821	pyridoxal biosynthetic process	BP
GO:0042822	pyridoxal phosphate metabolic process	BP
GO:0042823	pyridoxal phosphate biosynthetic process	BP
GO:0043094	cellular metabolic compound salvage	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046184	aldehyde biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048037	obsolete cofactor binding	MF
GO:0050236	pyridoxine:NADP 4-dehydrogenase activity	MF
GO:0050661	NADP binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0055035	plastid thylakoid membrane	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070402	NADPH binding	MF
GO:0071704	organic substance metabolic process	BP
GO:0072524	pyridine-containing compound metabolic process	BP
GO:0072525	pyridine-containing compound biosynthetic process	BP
GO:0090407	organophosphate biosynthetic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901615	organic hydroxy compound metabolic process	BP
GO:1901617	organic hydroxy compound biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00750	Vitamin B6 metabolism	-