Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_672.28047.g
View in Genome Browser
Position
scaffold672:2388764-2392610 (+)
3846bp
Gene Type
gene
Gene Description (Protein Product)
B3 domain-containing transcription factor
Organism
Populus pruinosa
Also AS Potri.009G108500AT3G18990Potri.009G108500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_674.28307.g ankyrin repeat-containing protein
Ppr_672.28058.g Extra-large guanine nucleotide-binding protein
Ppr_672.28059.g Extra-large guanine nucleotide-binding protein
Target gene
Ppr_1.10522.g Pentatricopeptide repeat-containing protein At3g02490
Ppr_1.10537.g Catalyzes the formation of S-adenosylmethionine from methionine and ATP
Ppr_1.10545.g NYN domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005886 plasma membrane CC
GO:0006950 response to stress BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009409 response to cold BP
GO:0009628 response to abiotic stimulus BP
GO:0009909 regulation of flower development BP
GO:0010048 vernalization response BP
GO:0016020 membrane CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043565 sequence-specific DNA binding MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048580 regulation of post-embryonic development BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051641 cellular localization BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070727 cellular macromolecule localization BP
GO:0071944 cell periphery CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP