Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_706.29630.g
View in Genome Browser
Position
scaffold706:3068492-3087066 (+)
18574bp
Gene Type
gene
Gene Description (Protein Product)
Structural maintenance of chromosomes protein
Organism
Populus pruinosa
Also AS Potri.003G107700AT5G61460Potri.003G107700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_7596.30831.g Non-structural maintenance of
Ppr_8282.33277.g Crossover junction endonuclease
Ppr_821.33137.g A type II topoisomerase that negatively supercoils closed circular double-stranded DNA in an ATP-dependent manner

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000724 double-strand break repair via homologous recombination BP
GO:0000725 recombinational repair BP
GO:0000819 sister chromatid segregation BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006302 double-strand break repair BP
GO:0006310 DNA recombination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007062 sister chromatid cohesion BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010165 response to X-ray BP
GO:0010212 response to ionizing radiation BP
GO:0016043 cellular component organization BP
GO:0022402 cell cycle process BP
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0050896 response to stimulus BP
GO:0051276 chromosome organization BP
GO:0051716 cellular response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090304 nucleic acid metabolic process BP
GO:0098813 nuclear chromosome segregation BP
GO:1901360 organic cyclic compound metabolic process BP