Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_7398.30496.g
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Position
scaffold7398:316920-333566 (+)
16646bp
Gene Type
gene
Gene Description (Protein Product)
thiol methyltransferase
Organism
Populus pruinosa
Also AS Potri.017G007000AT2G43940Potri.017G007000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_779.31907.g U-box domain-containing protein
Ppr_9433.34655.g Domain present in PSD-95, Dlg, and ZO-1/2.
Ppr_900.33873.g Glycogen synthase kinase-3 homolog

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005886 plasma membrane CC
GO:0006082 organic acid metabolic process BP
GO:0006790 sulfur compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008168 methyltransferase activity MF
GO:0008172 S-methyltransferase activity MF
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity MF
GO:0009056 catabolic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009536 plastid CC
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016143 S-glycoside metabolic process BP
GO:0016145 S-glycoside catabolic process BP
GO:0016740 transferase activity MF
GO:0016741 transferase activity, transferring one-carbon groups MF
GO:0018708 thiol S-methyltransferase activity MF
GO:0019748 secondary metabolic process BP
GO:0019757 glycosinolate metabolic process BP
GO:0019759 glycosinolate catabolic process BP
GO:0019760 glucosinolate metabolic process BP
GO:0019762 glucosinolate catabolic process BP
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032259 methylation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044273 sulfur compound catabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901136 carbohydrate derivative catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901658 glycosyl compound catabolic process BP