PPGR - Gene Detail

Basic Information

Gene ID	Ppr_771.31269.g View in Genome Browser
Position	scaffold771:3015335-3016591 (-) 1256bp
Gene Type	gene
Gene Description (Protein Product)	RING-type E3 ubiquitin transferase
Organism	Populus pruinosa
Also AS	Potri.005G057500AT5G09800Potri.005G057500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ppr_920.34565.g mediator of RNA polymerase II transcription subunit

Ppr_779.32532.g Regulator of G-protein signaling

Ppr_799.32897.g Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005102	signaling receptor binding	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005911	cell-cell junction	CC
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009506	plasmodesma	CC
GO:0009987	cellular process	BP
GO:0010033	response to organic substance	BP
GO:0010200	response to chitin	BP
GO:0010243	response to organonitrogen compound	BP
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0030054	cell junction	CC
GO:0032446	protein modification by small protein conjugation	BP
GO:0033612	receptor serine/threonine kinase binding	MF
GO:0036211	protein modification process	BP
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0050896	response to stimulus	BP
GO:0055044	symplast	CC
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0070696	transmembrane receptor protein serine/threonine kinase binding	MF
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901698	response to nitrogen compound	BP
GO:1901700	response to oxygen-containing compound	BP