PPGR - Gene Detail

Basic Information

Gene ID	Ppr_771.31297.g View in Genome Browser
Position	scaffold771:3272429-3275436 (+) 3007bp
Gene Type	gene
Gene Description (Protein Product)	Calcium-binding protein
Organism	Populus pruinosa
Also AS	Potri.005G052800AT4G14640Potri.005G052800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ppr_7775.31616.g leucine-rich repeat receptor-like serine threonine-protein kinase

Ppr_779.32177.g Belongs to the group II decarboxylase family

Ppr_910.33996.g WRKY transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003008	system process	BP
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005509	calcium ion binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0005856	cytoskeleton	CC
GO:0006928	obsolete movement of cell or subcellular component	BP
GO:0007600	sensory perception	BP
GO:0008092	cytoskeletal protein binding	MF
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0010941	regulation of cell death	BP
GO:0010942	positive regulation of cell death	BP
GO:0015629	actin cytoskeleton	CC
GO:0016459	myosin complex	CC
GO:0016461	unconventional myosin complex	CC
GO:0017022	myosin binding	MF
GO:0019233	sensory perception of pain	BP
GO:0030029	actin filament-based process	BP
GO:0030048	actin filament-based movement	BP
GO:0031476	myosin VI complex	CC
GO:0032028	myosin head/neck binding	MF
GO:0032036	myosin heavy chain binding	MF
GO:0032501	multicellular organismal process	BP
GO:0032991	protein-containing complex	CC
GO:0042981	regulation of apoptotic process	BP
GO:0043065	positive regulation of apoptotic process	BP
GO:0043067	regulation of programmed cell death	BP
GO:0043068	positive regulation of programmed cell death	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044430	obsolete cytoskeletal part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0046872	metal ion binding	MF
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050877	nervous system process	BP
GO:0065007	biological regulation	BP
GO:0070853	myosin VI binding	MF
GO:0070854	myosin VI heavy chain binding	MF
GO:0070855	myosin VI head/neck binding	MF
GO:0070864	sperm individualization complex	CC
GO:0070865	investment cone	CC

KEGG Term	Name	Description
map04626	Plant-pathogen interaction	Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map04626	Plant-pathogen interaction	Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.
map04070	Phosphatidylinositol signaling system	-