PPGR - Gene Detail

Basic Information

Gene ID	Ppr_8686.33627.g View in Genome Browser
Position	scaffold8686:67702-69306 (-) 1604bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Organism	Populus pruinosa
Also AS	Potri.012G034700AT2G34790Potri.012G034700.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ppr_913.34260.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Ppr_913.34259.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Ppr_910.34033.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000741	karyogamy	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005911	cell-cell junction	CC
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0006996	organelle organization	BP
GO:0006997	nucleus organization	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009506	plasmodesma	CC
GO:0009553	embryo sac development	BP
GO:0009559	embryo sac central cell differentiation	BP
GO:0009561	megagametogenesis	BP
GO:0009790	embryo development	BP
GO:0009791	post-embryonic development	BP
GO:0009793	embryo development ending in seed dormancy	BP
GO:0009987	cellular process	BP
GO:0010154	fruit development	BP
GO:0010197	polar nucleus fusion	BP
GO:0016043	cellular component organization	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	MF
GO:0022414	reproductive process	BP
GO:0030054	cell junction	CC
GO:0030154	cell differentiation	BP
GO:0030312	external encapsulating structure	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0044464	obsolete cell part	CC
GO:0045551	cinnamyl-alcohol dehydrogenase activity	MF
GO:0048229	gametophyte development	BP
GO:0048284	organelle fusion	BP
GO:0048316	seed development	BP
GO:0048608	reproductive structure development	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050268	coniferyl-alcohol dehydrogenase activity	MF
GO:0050896	response to stimulus	BP
GO:0055044	symplast	CC
GO:0055114	obsolete oxidation-reduction process	BP
GO:0061458	reproductive system development	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.