Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_910.34018.g
View in Genome Browser
Position
scaffold910:502466-506517 (+)
4051bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the small GTPase superfamily. Arf family
Organism
Populus pruinosa
Also AS Potri.018G013700AT2G24765Potri.018G013700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_920.34565.g mediator of RNA polymerase II transcription subunit
Ppr_97.34980.g Belongs to the synaptobrevin family
Ppr_973.34872.g The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005795 Golgi stack CC
GO:0005886 plasma membrane CC
GO:0008150 biological_process BP
GO:0010035 response to inorganic substance BP
GO:0010038 response to metal ion BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0031984 organelle subcompartment CC
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046686 response to cadmium ion BP
GO:0050896 response to stimulus BP
GO:0071944 cell periphery CC
GO:0098791 Golgi apparatus subcompartment CC