PPGR - Gene Detail

Basic Information

Gene ID	Ppr_913.34285.g View in Genome Browser
Position	scaffold913:472255-472686 (-) 431bp
Gene Type	gene
Gene Description (Protein Product)	calcium-binding protein
Organism	Populus pruinosa
Also AS	Potri.001G332900AT1G76650Potri.001G332900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Ppr_9147.34361.g Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Ppr_9741.34909.g Belongs to the actin family

Ppr_966.34744.g Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005509	calcium ion binding	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006950	response to stress	BP
GO:0008150	biological_process	BP
GO:0009611	response to wounding	BP
GO:0016020	membrane	CC
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0044464	obsolete cell part	CC
GO:0046872	metal ion binding	MF
GO:0050896	response to stimulus	BP
GO:0071944	cell periphery	CC

KEGG Term	Name	Description
map04626	Plant-pathogen interaction	Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.