PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Ppr_950.34674.g View in Genome Browser
Position	scaffold950:91004-92601 (+) 1597bp
Gene Type	gene
Gene Description (Protein Product)	prolyl 4-hydroxylase
Organism	Populus pruinosa
Also AS	Potri.017G075300AT3G28480Potri.017G075300.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004656	procollagen-proline 4-dioxygenase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005788	endoplasmic reticulum lumen	CC
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009790	embryo development	BP
GO:0009792	embryo development ending in birth or egg hatching	BP
GO:0009987	cellular process	BP
GO:0010171	body morphogenesis	BP
GO:0010172	embryonic body morphogenesis	BP
GO:0012505	endomembrane system	CC
GO:0016491	oxidoreductase activity	MF
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	MF
GO:0016706	2-oxoglutarate-dependent dioxygenase activity	MF
GO:0018126	protein hydroxylation	BP
GO:0018193	peptidyl-amino acid modification	BP
GO:0018208	peptidyl-proline modification	BP
GO:0018996	molting cycle, collagen and cuticulin-based cuticle	BP
GO:0019511	peptidyl-proline hydroxylation	BP
GO:0019538	protein metabolic process	BP
GO:0019798	procollagen-proline dioxygenase activity	MF
GO:0031543	peptidyl-proline dioxygenase activity	MF
GO:0031545	peptidyl-proline 4-dioxygenase activity	MF
GO:0031974	membrane-enclosed lumen	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0036211	protein modification process	BP
GO:0040002	collagen and cuticulin-based cuticle development	BP
GO:0040008	regulation of growth	BP
GO:0040014	regulation of multicellular organism growth	BP
GO:0040018	positive regulation of multicellular organism growth	BP
GO:0042303	molting cycle	BP
GO:0042335	cuticle development	BP
GO:0042338	cuticle development involved in collagen and cuticulin-based cuticle molting cycle	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0045927	positive regulation of growth	BP
GO:0048518	positive regulation of biological process	BP
GO:0048598	embryonic morphogenesis	BP
GO:0048638	regulation of developmental growth	BP
GO:0048639	positive regulation of developmental growth	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0051094	positive regulation of developmental process	BP
GO:0051213	dioxygenase activity	MF
GO:0051239	regulation of multicellular organismal process	BP
GO:0051240	positive regulation of multicellular organismal process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0065007	biological regulation	BP
GO:0070013	intracellular organelle lumen	CC
GO:0071704	organic substance metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00330	Arginine and proline metabolism	-