Basic Information
Gene ID
gene-POTOM_000051
Position
CM031968.1:592558-593753 (+)
1195bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the iron ascorbate-dependent oxidoreductase family
Organism
Also AS Potri.001G007100AT3G13610Potri.001G007100.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-POTOM_033212 caffeoyl-CoA O-methyltransferase
gene-POTOM_002358 caffeoyl-CoA O-methyltransferase
gene-POTOM_034606 caffeoyl-CoA O-methyltransferase
Regulatory gene
gene-POTOM_000237 transcription factor
gene-POTOM_000682 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009058 biosynthetic process BP
GO:0009636 response to toxic substance BP
GO:0009698 phenylpropanoid metabolic process BP
GO:0009699 phenylpropanoid biosynthetic process BP
GO:0009804 coumarin metabolic process BP
GO:0009805 coumarin biosynthetic process BP
GO:0009987 cellular process BP
GO:0010035 response to inorganic substance BP
GO:0010421 hydrogen peroxide-mediated programmed cell death BP
GO:0012501 programmed cell death BP
GO:0016491 oxidoreductase activity MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019748 secondary metabolic process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0034614 cellular response to reactive oxygen species BP
GO:0035690 cellular response to xenobiotic stimulus BP
GO:0036473 cell death in response to oxidative stress BP
GO:0036474 cell death in response to hydrogen peroxide BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0042542 response to hydrogen peroxide BP
GO:0044237 cellular metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044550 secondary metabolite biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046677 response to antibiotic BP
GO:0050896 response to stimulus BP
GO:0051213 dioxygenase activity MF
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070301 cellular response to hydrogen peroxide BP
GO:0070887 cellular response to chemical stimulus BP
GO:0071236 cellular response to antibiotic BP
GO:0071704 organic substance metabolic process BP
GO:0097237 cellular response to toxic substance BP
GO:0097468 programmed cell death in response to reactive oxygen species BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901701 cellular response to oxygen-containing compound BP
KEGG Term Name Description
map04141 Protein processing in endoplasmic reticulum The endoplasmic reticulum (ER) is a subcellular organelle where proteins are folded with the help of lumenal chaperones. Newly synthesized peptides enter the ER via the sec61 pore and are glycosylated. Correctly folded proteins are packaged into transport vesicles that shuttle them to the Golgi complex. Misfolded proteins are retained within the ER lumen in complex with molecular chaperones. Proteins that are terminally misfolded bind to BiP and are directed toward degradation through the proteasome in a process called ER-associated degradation (ERAD). Accumulation of misfolded proteins in the ER causes ER stress and activates a signaling pathway called the unfolded protein response (UPR). In certain severe situations, however, the protective mechanisms activated by the UPR are not sufficient to restore normal ER function and cells die by apoptosis.
map04120 Ubiquitin mediated proteolysis Protein ubiquitination plays an important role in eukaryotic cellular processes. It mainly functions as a signal for 26S proteasome dependent protein degradation. The addition of ubiquitin to proteins being degraded is performed by a reaction cascade consisting of three enzymes, named E1 (ubiquitin activating enzyme), E2 (ubiquitin conjugating enzyme), and E3 (ubiquitin ligase). Each E3 has specificity to its substrate, or proteins to be targeted by ubiquitination. Many E3s are discovered in eukaryotes and they are classified into four types: HECT type, U-box type, single RING-finger type, and multi-subunit RING-finger type. Multi-subunit RING-finger E3s are exemplified by cullin-Rbx E3s and APC/C. They consist of a RING-finger-containing subunit (RBX1 or RBX2) that functions to bind E2s, a scaffold-like cullin molecule, adaptor proteins, and a target recognizing subunit that binds substrates.
map01110 Biosynthesis of secondary metabolites -