PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	gene-POTOM_019621 View in Genome Browser
Position	CM031976.1:14559615-14562570 (-) 2955bp
Gene Type	gene
Gene Description (Protein Product)	Floral homeotic protein PMADS
Organism	Populus tomentosa
Also AS	Potri.005G182200AT5G20240Potri.005G182200.v4.1

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-POTOM_055135 Developmental protein SEPALLATA gene-POTOM_053960 Developmental protein SEPALLATA gene-POTOM_031462 MADS-box protein
Regulatory gene	gene-POTOM_000145 AP2-like ethylene-responsive transcription factor gene-POTOM_000501 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs) gene-POTOM_000682 Dof zinc finger protein
Target gene	gene-POTOM_000001 Histone-lysine N-methyltransferase ASHH2-like gene-POTOM_000002 Glutathione S-transferase gene-POTOM_000013 pumilio homolog

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0003002	regionalization	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009791	post-embryonic development	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0009908	flower development	BP
GO:0010093	specification of floral organ identity	BP
GO:0010097	specification of stamen identity	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022414	reproductive process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0048367	shoot system development	BP
GO:0048437	floral organ development	BP
GO:0048438	floral whorl development	BP
GO:0048443	stamen development	BP
GO:0048444	floral organ morphogenesis	BP
GO:0048448	stamen morphogenesis	BP
GO:0048449	floral organ formation	BP
GO:0048455	stamen formation	BP
GO:0048466	androecium development	BP
GO:0048608	reproductive structure development	BP
GO:0048646	anatomical structure formation involved in morphogenesis	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061458	reproductive system development	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0090567	reproductive shoot system development	BP
GO:0090696	post-embryonic plant organ development	BP
GO:0090697	post-embryonic plant organ morphogenesis	BP
GO:0090698	post-embryonic plant morphogenesis	BP
GO:0090701	specification of plant organ identity	BP
GO:0097159	organic cyclic compound binding	MF
GO:0099402	plant organ development	BP
GO:0140110	transcription regulator activity	MF
GO:1901363	heterocyclic compound binding	MF
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:1905392	plant organ morphogenesis	BP
GO:1905393	plant organ formation	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP