Basic Information
Gene ID
gene-POTOM_048855
Position
CM031995.1:15120215-15121871 (+)
1656bp
Gene Type
gene
Gene Description (Protein Product)
Small ubiquitin-related modifier
Organism
Also AS Potri.014G190300AT4G26840Potri.014G190300.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-POTOM_060388 Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria
gene-POTOM_050709 SUMO-activating enzyme subunit
gene-POTOM_049610 SUMO-activating enzyme subunit
Regulatory gene
gene-POTOM_001090 GAGA binding protein-like family
gene-POTOM_017755 Protein BASIC PENTACYSTEINE4-like
gene-POTOM_022058 Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.