Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-POTOM_050992
View in Genome Browser
Position
CM031997.1:12305919-12308254 (+)
2335bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the cytochrome b5 family
Organism
Populus tomentosa
Also AS Potri.015G139800AT3G48890Potri.015G139800.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-POTOM_054635 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-POTOM_061243 Ubiquitin family
gene-POTOM_055429 Ubiquitin-2 like Rad60 SUMO-like
Regulatory gene
gene-POTOM_001090 GAGA binding protein-like family
gene-POTOM_017755 Protein BASIC PENTACYSTEINE4-like
gene-POTOM_022058 Protein BASIC PENTACYSTEINE6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0001558 regulation of cell growth BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005496 steroid binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005794 Golgi apparatus CC
GO:0005886 plasma membrane CC
GO:0008150 biological_process BP
GO:0008289 lipid binding MF
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0019904 protein domain specific binding MF
GO:0020037 heme binding MF
GO:0030308 negative regulation of cell growth BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034357 photosynthetic membrane CC
GO:0040008 regulation of growth BP
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045926 negative regulation of growth BP
GO:0046906 tetrapyrrole binding MF
GO:0048037 obsolete cofactor binding MF
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051128 regulation of cellular component organization BP
GO:0055035 plastid thylakoid membrane CC
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF