Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
gene-POTOM_060943
View in Genome Browser
Position
JAAWWB010001060.1:13625-19276 (+)
5651bp
Gene Type
gene
Gene Description (Protein Product)
Pheophorbide A oxygenase
Organism
Populus tomentosa
Also AS Potri.004G217200AT3G44880Potri.004G217200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-POTOM_062107 The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated
gene-POTOM_060961 Photosystem II D1 precursor processing protein PSB27-H2
gene-POTOM_061455 Belongs to the peptidase C1 family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0002376 immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006778 porphyrin-containing compound metabolic process BP
GO:0006787 porphyrin-containing compound catabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009056 catabolic process BP
GO:0009507 chloroplast CC
GO:0009526 plastid envelope CC
GO:0009528 plastid inner membrane CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009706 chloroplast inner membrane CC
GO:0009791 post-embryonic development BP
GO:0009814 defense response to other organism BP
GO:0009816 defense response to bacterium BP
GO:0009908 flower development BP
GO:0009941 chloroplast envelope CC
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0015994 chlorophyll metabolic process BP
GO:0015996 chlorophyll catabolic process BP
GO:0016020 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors MF
GO:0019439 aromatic compound catabolic process BP
GO:0019866 organelle inner membrane CC
GO:0022414 reproductive process BP
GO:0031090 organelle membrane CC
GO:0031967 organelle envelope CC
GO:0031969 chloroplast membrane CC
GO:0031975 envelope CC
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032441 pheophorbide a oxygenase activity MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0033013 tetrapyrrole metabolic process BP
GO:0033015 tetrapyrrole catabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0042170 plastid membrane CC
GO:0042440 pigment metabolic process BP
GO:0042742 defense response to bacterium BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0046149 pigment catabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0048367 shoot system development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050896 response to stimulus BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051187 obsolete cofactor catabolic process BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061458 reproductive system development BP
GO:0071704 organic substance metabolic process BP
GO:0090567 reproductive shoot system development BP
GO:0098542 defense response to other organism BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00860 Porphyrin and chlorophyll metabolism -