Basic Information
Gene ID
Potra2n10c20799
Position
chr10:4471564-4477506 (-)
5942bp
Gene Type
gene
Gene Description (Protein Product)
cytosolic
Organism
Also AS Potri.010G184200AT5G05460Potri.010G184200.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n14c27552 Lysosomal
Potra2n12c24615 Lysosomal alpha-mannosidase-like
Potra2n7c16147 Lysosomal
Regulatory gene
Potra2n10c20146 GATA transcription factor
Potra2n10c20356 Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis
Potra2n10c20357 No apical meristem (NAM) protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0000270 peptidoglycan metabolic process BP
GO:0000323 lytic vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004563 beta-N-acetylhexosaminidase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005773 vacuole CC
GO:0005975 carbohydrate metabolic process BP
GO:0006022 aminoglycan metabolic process BP
GO:0006026 aminoglycan catabolic process BP
GO:0006027 glycosaminoglycan catabolic process BP
GO:0006464 protein modification process BP
GO:0006491 N-glycan processing BP
GO:0006517 protein deglycosylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009100 glycoprotein metabolic process BP
GO:0009253 peptidoglycan catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009987 cellular process BP
GO:0015929 hexosaminidase activity MF
GO:0016052 carbohydrate catabolic process BP
GO:0016231 beta-N-acetylglucosaminidase activity MF
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0019538 protein metabolic process BP
GO:0030203 glycosaminoglycan metabolic process BP
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity MF
GO:0035821 modulation of process of another organism BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044033 obsolete multi-organism metabolic process BP
GO:0044035 obsolete multi-organism catabolic process BP
GO:0044040 obsolete multi-organism carbohydrate metabolic process BP
GO:0044041 obsolete multi-organism carbohydrate catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044278 cell wall disruption in another organism BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044421 obsolete extracellular region part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051672 obsolete catabolism by organism of cell wall peptidoglycan in other organism BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0071704 organic substance metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901136 carbohydrate derivative catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map00511 Other glycan degradation -