Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n14c27444
View in Genome Browser
Position
chr14:8983406-8988793 (-)
5387bp
Gene Type
gene
Gene Description (Protein Product)
Peptide chain release factor
Organism
Populus tremula
Also AS Potri.014G133400AT3G62910Potri.014G133400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n4c10315 50S ribosomal protein L9
Potra2n2c5212 Belongs to the universal ribosomal protein uS9 family
Potra2n17c30881 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
Regulatory gene
Potra2n10c20596 Dof zinc finger protein
Potra2n10c20949 Cyclic dof factor
Potra2n11c23230 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003723 RNA binding MF
GO:0003747 translation release factor activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006412 translation BP
GO:0006415 translational termination BP
GO:0006518 peptide metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0008079 translation termination factor activity MF
GO:0008135 translation factor activity, RNA binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009668 plastid membrane organization BP
GO:0009987 cellular process BP
GO:0010027 thylakoid membrane organization BP
GO:0010467 gene expression BP
GO:0016043 cellular component organization BP
GO:0019538 protein metabolic process BP
GO:0022411 cellular component disassembly BP
GO:0032544 plastid translation BP
GO:0032984 protein-containing complex disassembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0043043 peptide biosynthetic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043603 amide metabolic process BP
GO:0043604 amide biosynthetic process BP
GO:0043624 protein-containing complex disassembly BP
GO:0043933 protein-containing complex organization BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0061024 membrane organization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP