Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n18c32085
View in Genome Browser
Position
chr18:1129579-1132954 (-)
3375bp
Gene Type
gene
Gene Description (Protein Product)
May act as a component of the auxin efflux carrier
Organism
Populus tremula
Also AS Potri.018G139400AT5G57090Potri.018G139400.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n8c16657 serine threonine-protein phosphatase
Potra2n9c18803 Subunit of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome
Potra2n8c17716 Serine threonine-protein phosphatase 2A 65 kDa regulatory subunit A
Regulatory gene
Potra2n10c20596 Dof zinc finger protein
Potra2n10c20949 Cyclic dof factor
Potra2n10c20952 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000323 lytic vacuole CC
GO:0001666 response to hypoxia BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005783 endoplasmic reticulum CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009628 response to abiotic stimulus BP
GO:0009629 response to gravity BP
GO:0009630 gravitropism BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009743 response to carbohydrate BP
GO:0009746 response to hexose BP
GO:0009749 response to glucose BP
GO:0009914 hormone transport BP
GO:0009921 auxin efflux carrier complex CC
GO:0009925 basal plasma membrane CC
GO:0009926 auxin polar transport BP
GO:0009958 positive gravitropism BP
GO:0009966 regulation of signal transduction BP
GO:0010033 response to organic substance BP
GO:0010252 auxin homeostasis BP
GO:0010315 auxin export across the plasma membrane BP
GO:0010329 auxin efflux transmembrane transporter activity MF
GO:0010646 regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0012505 endomembrane system CC
GO:0015562 efflux transmembrane transporter activity MF
GO:0016020 membrane CC
GO:0016323 basolateral plasma membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0023051 regulation of signaling BP
GO:0032991 protein-containing complex CC
GO:0034284 response to monosaccharide BP
GO:0036293 response to decreased oxygen levels BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045178 basal part of cell CC
GO:0048583 regulation of response to stimulus BP
GO:0048878 chemical homeostasis BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070482 response to oxygen levels BP
GO:0071944 cell periphery CC
GO:0080161 auxin transmembrane transporter activity MF
GO:0098590 plasma membrane region CC
GO:0098796 membrane protein complex CC
GO:0098797 plasma membrane protein complex CC
GO:1901700 response to oxygen-containing compound BP