Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n1c1628
View in Genome Browser
Position
chr1:16953470-16966464 (+)
12994bp
Gene Type
gene
Gene Description (Protein Product)
Malonate--CoA
Cytochrome c-type biogenesis protein
Organism
Populus tremula
Also AS Potri.003G052000Potri.001G185500AT1G15220AT3G16170Potri.003G052000.v4.1Potri.001G185500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n7c15674 Carbon-nitrogen hydrolase
Potra2n7c16488 Belongs to the aldehyde dehydrogenase family
Potra2n2c4688 Aldehyde dehydrogenase family
Regulatory gene
Potra2n10c21556 Protein BASIC PENTACYSTEINE2-like
Potra2n12c24053 GAGA binding protein-like family
Potra2n12c24055 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005740 mitochondrial envelope CC
GO:0005743 mitochondrial inner membrane CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016491 oxidoreductase activity MF
GO:0017004 cytochrome complex assembly BP
GO:0019866 organelle inner membrane CC
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0031090 organelle membrane CC
GO:0031966 mitochondrial membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034622 protein-containing complex assembly BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0061458 reproductive system development BP
GO:0065003 protein-containing complex assembly BP
GO:0071840 cellular component organization or biogenesis BP
GO:0005634 nucleus CC
GO:0005829 cytosol CC
GO:0006082 organic acid metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006631 fatty acid metabolic process BP
GO:0006633 fatty acid biosynthetic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016054 organic acid catabolic process BP
GO:0016405 CoA-ligase activity MF
GO:0016874 ligase activity MF
GO:0016877 ligase activity, forming carbon-sulfur bonds MF
GO:0016878 acid-thiol ligase activity MF
GO:0019752 carboxylic acid metabolic process BP
GO:0032787 monocarboxylic acid metabolic process BP
GO:0043436 oxoacid metabolic process BP
GO:0043648 dicarboxylic acid metabolic process BP
GO:0043649 dicarboxylic acid catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044282 small molecule catabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046395 carboxylic acid catabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0072330 monocarboxylic acid biosynthetic process BP
GO:0090409 malonyl-CoA synthetase activity MF
GO:0090410 malonate catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1901576 organic substance biosynthetic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00280 Valine, leucine and isoleucine degradation -
map00061 Fatty acid biosynthesis -