Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n2c4266
View in Genome Browser
Position
chr2:2176341-2186385 (-)
10044bp
Gene Type
gene
Gene Description (Protein Product)
Encoded by
Organism
Populus tremula
Also AS Potri.002G238200AT3G26720Potri.002G238200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n7c16147 Lysosomal
Potra2n7c16147 26S proteasome non-atpase regulatory subunit
Potra2n3c6704 Belongs to the glycosyl hydrolase 2 family
Regulatory gene
Potra2n1085s36968 Transcription factor
Potra2n10c20245 transcription factor
Potra2n10c20596 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000323 lytic vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004559 alpha-mannosidase activity MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005975 carbohydrate metabolic process BP
GO:0005996 monosaccharide metabolic process BP
GO:0006013 mannose metabolic process BP
GO:0006464 protein modification process BP
GO:0006517 protein deglycosylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009100 glycoprotein metabolic process BP
GO:0009505 plant-type cell wall CC
GO:0009987 cellular process BP
GO:0015923 mannosidase activity MF
GO:0016020 membrane CC
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0019318 hexose metabolic process BP
GO:0019538 protein metabolic process BP
GO:0030312 external encapsulating structure CC
GO:0031090 organelle membrane CC
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:0098588 bounding membrane of organelle CC
GO:0098805 membrane CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
KEGG Term Name Description
map00511 Other glycan degradation -