Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n4c9520
View in Genome Browser
Position
chr4:10355620-10358940 (-)
3320bp
Gene Type
gene
Gene Description (Protein Product)
Sister chromatid cohesion protein
Organism
Populus tremula
Also AS Potri.017G092600AT5G15540Potri.017G092600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n7c16077
Potra2n561s35961 Structural maintenance of chromosomes protein
Potra2n588s36075 Structural maintenance of chromosomes protein
Regulatory gene
Potra2n10c20185 -
Potra2n10c20485 Transcription factor
Potra2n10c20596 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000070 mitotic sister chromatid segregation BP
GO:0000122 negative regulation of transcription by RNA polymerase II BP
GO:0000278 mitotic cell cycle BP
GO:0000280 nuclear division BP
GO:0000428 DNA-directed RNA polymerase complex CC
GO:0000819 sister chromatid segregation BP
GO:0001654 eye development BP
GO:0001655 urogenital system development BP
GO:0001656 metanephros development BP
GO:0001822 kidney development BP
GO:0003006 developmental process involved in reproduction BP
GO:0003007 heart morphogenesis BP
GO:0003008 system process BP
GO:0003151 outflow tract morphogenesis BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0007049 cell cycle BP
GO:0007059 chromosome segregation BP
GO:0007062 sister chromatid cohesion BP
GO:0007064 mitotic sister chromatid cohesion BP
GO:0007135 meiosis II BP
GO:0007275 multicellular organism development BP
GO:0007399 nervous system development BP
GO:0007417 central nervous system development BP
GO:0007420 brain development BP
GO:0007423 sensory organ development BP
GO:0007507 heart development BP
GO:0007548 sex differentiation BP
GO:0007600 sensory perception BP
GO:0007605 sensory perception of sound BP
GO:0008022 obsolete protein C-terminus binding MF
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009628 response to abiotic stimulus BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009887 animal organ morphogenesis BP
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010165 response to X-ray BP
GO:0010171 body morphogenesis BP
GO:0010212 response to ionizing radiation BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010558 negative regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0010638 positive regulation of organelle organization BP
GO:0010720 positive regulation of cell development BP
GO:0016043 cellular component organization BP
GO:0016591 RNA polymerase II, holoenzyme CC
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019899 enzyme binding MF
GO:0019904 protein domain specific binding MF
GO:0022008 neurogenesis BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0022607 cellular component assembly BP
GO:0030154 cell differentiation BP
GO:0030326 embryonic limb morphogenesis BP
GO:0030334 regulation of cell migration BP
GO:0030335 positive regulation of cell migration BP
GO:0030880 RNA polymerase complex CC
GO:0031056 regulation of histone modification BP
GO:0031058 positive regulation of histone modification BP
GO:0031063 regulation of histone deacetylation BP
GO:0031065 positive regulation of histone deacetylation BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031327 negative regulation of cellular biosynthetic process BP
GO:0031399 regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032039 integrator complex CC
GO:0032116 SMC loading complex CC
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032879 regulation of localization BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033043 regulation of organelle organization BP
GO:0033044 regulation of chromosome organization BP
GO:0033365 protein localization to organelle BP
GO:0033554 cellular response to stress BP
GO:0034085 establishment of sister chromatid cohesion BP
GO:0034086 maintenance of sister chromatid cohesion BP
GO:0034088 maintenance of mitotic sister chromatid cohesion BP
GO:0034502 protein localization to chromosome BP
GO:0034508 centromere complex assembly BP
GO:0034613 protein localization BP
GO:0034622 protein-containing complex assembly BP
GO:0035107 appendage morphogenesis BP
GO:0035108 limb morphogenesis BP
GO:0035112 genitalia morphogenesis BP
GO:0035113 embryonic appendage morphogenesis BP
GO:0035115 embryonic forelimb morphogenesis BP
GO:0035136 forelimb morphogenesis BP
GO:0035239 tube morphogenesis BP
GO:0035261 external genitalia morphogenesis BP
GO:0035295 tube development BP
GO:0040007 growth BP
GO:0040008 regulation of growth BP
GO:0040012 regulation of locomotion BP
GO:0040017 positive regulation of locomotion BP
GO:0042471 ear morphogenesis BP
GO:0042634 regulation of hair cycle BP
GO:0042826 histone deacetylase binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043388 positive regulation of DNA binding BP
GO:0043583 ear development BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044093 positive regulation of molecular function BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0045132 meiotic chromosome segregation BP
GO:0045144 meiotic sister chromatid segregation BP
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0045892 negative regulation of DNA-templated transcription BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0045995 regulation of embryonic development BP
GO:0047485 obsolete protein N-terminus binding MF
GO:0048285 organelle fission BP
GO:0048316 seed development BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048546 digestive tract morphogenesis BP
GO:0048557 embryonic digestive tract morphogenesis BP
GO:0048562 embryonic organ morphogenesis BP
GO:0048565 digestive tract development BP
GO:0048566 embryonic digestive tract development BP
GO:0048568 embryonic organ development BP
GO:0048589 developmental growth BP
GO:0048592 eye morphogenesis BP
GO:0048598 embryonic morphogenesis BP
GO:0048608 reproductive structure development BP
GO:0048638 regulation of developmental growth BP
GO:0048699 generation of neurons BP
GO:0048731 system development BP
GO:0048736 appendage development BP
GO:0048806 genitalia development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050767 regulation of neurogenesis BP
GO:0050769 positive regulation of neurogenesis BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050877 nervous system process BP
GO:0050890 cognition BP
GO:0050896 response to stimulus BP
GO:0050954 sensory perception of mechanical stimulus BP
GO:0051094 positive regulation of developmental process BP
GO:0051098 regulation of binding BP
GO:0051099 positive regulation of binding BP
GO:0051101 regulation of DNA binding BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051177 meiotic sister chromatid cohesion BP
GO:0051179 localization BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051253 negative regulation of RNA metabolic process BP
GO:0051270 obsolete regulation of cellular component movement BP
GO:0051272 obsolete positive regulation of cellular component movement BP
GO:0051276 chromosome organization BP
GO:0051321 meiotic cell cycle BP
GO:0051641 cellular localization BP
GO:0051716 cellular response to stimulus BP
GO:0051960 regulation of nervous system development BP
GO:0051962 positive regulation of nervous system development BP
GO:0055029 nuclear DNA-directed RNA polymerase complex CC
GO:0055123 digestive system development BP
GO:0060065 uterus development BP
GO:0060173 limb development BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060284 regulation of cell development BP
GO:0060322 head development BP
GO:0060323 head morphogenesis BP
GO:0060324 face development BP
GO:0060325 face morphogenesis BP
GO:0061008 hepaticobiliary system development BP
GO:0061010 gallbladder development BP
GO:0061038 uterus morphogenesis BP
GO:0061458 reproductive system development BP
GO:0061695 transferase complex, transferring phosphorus-containing groups CC
GO:0061983 meiosis II cell cycle process BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070087 chromo shadow domain binding MF
GO:0070192 chromosome organization involved in meiotic cell cycle BP
GO:0070727 cellular macromolecule localization BP
GO:0071168 protein localization to chromatin BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071479 cellular response to ionizing radiation BP
GO:0071481 cellular response to X-ray BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071921 cohesin loading BP
GO:0072001 renal system development BP
GO:0072359 circulatory system development BP
GO:0080090 regulation of primary metabolic process BP
GO:0090311 regulation of protein deacetylation BP
GO:0090312 positive regulation of protein deacetylation BP
GO:0090596 sensory organ morphogenesis BP
GO:0090694 Scc2-Scc4 cohesin loading complex CC
GO:0098813 nuclear chromosome segregation BP
GO:0104004 cellular response to environmental stimulus BP
GO:0140013 meiotic nuclear division BP
GO:0140014 mitotic nuclear division BP
GO:1902275 regulation of chromatin organization BP
GO:1902494 catalytic complex CC
GO:1902679 negative regulation of RNA biosynthetic process BP
GO:1903046 meiotic cell cycle process BP
GO:1903047 mitotic cell cycle process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903507 negative regulation of nucleic acid-templated transcription BP
GO:1905269 positive regulation of chromatin organization BP
GO:1990234 transferase complex CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000113 negative regulation of cellular macromolecule biosynthetic process BP
GO:2000145 regulation of cell motility BP
GO:2000147 positive regulation of cell motility BP
GO:2001141 regulation of RNA biosynthetic process BP
GO:2001222 regulation of neuron migration BP
GO:2001224 positive regulation of neuron migration BP
GO:2001252 positive regulation of chromosome organization BP