Basic Information
Gene ID
Potra2n548s35916
Position
scaffold548:57161-60284 (+)
3123bp
Gene Type
gene
Gene Description (Protein Product)
(-)-germacrene D synthase-like
Organism
Also AS Potri.015G085500AT5G23960Potri.015G085500.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19038 Squalene synthase-like
Potra2n5c11915 Belongs to the UPP synthase family
Potra2n7c15563 Protein farnesyltransferase geranylgeranyltransferase type-1 subunit

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map00909 Sesquiterpenoid biosynthesis Sesquiterpenoids (C15 terpenoids) are a group of terpenoids consisting of three isoprene units. They are derive from farnesyl diphosphate (FPP) and can be cyclized to produce various skeletal structures. Sesquiterpenoid biosynthesis begins with the loss of diphosphate from FPP under the action of sesquiterpene synthesis enzymes, generating an allylic cation that is highly susceptible to intramolecular attacks. Cyclization of the farnesyl cation may take place onto either of the remaining double bonds with the result that 6-, 10-, or 11-membered rings may be formed. Many sesquiterpenoids have been isolated from plants, fungi, marine organisms, and Streptomyces species. This map shows a few examples of acyclic and cyclic sesquiterpenoids.