Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n5c10892
View in Genome Browser
Position
chr5:2692620-2700032 (+)
7412bp
Gene Type
gene
Gene Description (Protein Product)
Photosystem II reaction center W protein
Belongs to the glycosyltransferase 8 family
Organism
Populus tremula
Also AS Potri.005G218900Potri.005G218800AT1G06780AT2G30570Potri.005G218900.v4.1Potri.005G218800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n6c13982 Ectonucleotide pyrophosphatase phosphodiesterase family member
Potra2n6c13787 UDP-glucuronate 4-epimerase
Potra2n7c16335 oxygen-evolving enhancer protein
Regulatory gene
Potra2n10c20596 Dof zinc finger protein
Potra2n10c20949 Cyclic dof factor
Potra2n10c21715 Protein tesmin TSO1-like CXC

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0031090 organelle membrane CC
GO:0031984 organelle subcompartment CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0008150 biological_process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0010109 regulation of photosynthesis BP
GO:0019222 regulation of metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031976 plastid thylakoid CC
GO:0034357 photosynthetic membrane CC
GO:0042548 regulation of photosynthesis, light reaction BP
GO:0042549 photosystem II stabilization BP
GO:0042651 thylakoid membrane CC
GO:0043467 regulation of generation of precursor metabolites and energy BP
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0055035 plastid thylakoid membrane CC
GO:0065007 biological regulation BP
KEGG Term Name Description
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00520 Amino sugar and nucleotide sugar metabolism -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.