Basic Information
Gene ID
Potra2n5c12306
Position
chr5:17085920-17090500 (-)
4580bp
Gene Type
gene
Gene Description (Protein Product)
SWIM zinc finger family protein
Photosystem I reaction center subunit N
Organism
Also AS Potri.005G063300Potri.007G106000AT5G64040AT1G60560Potri.005G063300.v4.1Potri.007G106000.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n6c13067 Photosystem I reaction center subunit psaK
Potra2n8c18309 Photosystem II core complex proteins psbY
Potra2n8c18017 Photosystem I reaction center subunit II
Regulatory gene
Potra2n10c20596 Dof zinc finger protein
Potra2n10c20949 Cyclic dof factor
Potra2n10c20952 MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0019904 protein domain specific binding MF
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.