Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n6c12839
View in Genome Browser
Position
chr6:208071-220676 (+)
12605bp
Gene Type
gene
Gene Description (Protein Product)
DDB1- and CUL4-associated factor homolog
Acetylglutamate kinase
Organism
Populus tremula
Also AS Potri.006G280200Potri.006G280100AT4G31160AT3G57560Potri.006G280200.v4.1Potri.006G280100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n735s36624 Belongs to the cullin family
Potra2n7c16190 WD40 repeats
Potra2n9c18936 Heavy metal-associated isoprenylated plant protein
Regulatory gene
Potra2n10c20185 -
Potra2n10c20356 Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis
Potra2n10c20357 No apical meristem (NAM) protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009908 flower development BP
GO:0010154 fruit development BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048366 leaf development BP
GO:0048367 shoot system development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0061458 reproductive system development BP
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003991 acetylglutamate kinase activity MF
GO:0005488 binding MF
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006525 arginine metabolic process BP
GO:0006526 arginine biosynthetic process BP
GO:0006591 ornithine metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008152 metabolic process BP
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009987 cellular process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016597 amino acid binding MF
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016774 phosphotransferase activity, carboxyl group as acceptor MF
GO:0019752 carboxylic acid metabolic process BP
GO:0031406 carboxylic acid binding MF
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0034618 arginine binding MF
GO:0036094 small molecule binding MF
GO:0042450 arginine biosynthetic process via ornithine BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043177 organic acid binding MF
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044422 obsolete organelle part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -