Basic Information
Gene ID
Potra2n8c16677
Position
chr8:201321-209029 (+)
7708bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase
Organism
Also AS Potri.008G005800AT1G50440Potri.008G005800.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description


Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
GO Term Description GO Category
GO:0000209 protein polyubiquitination BP
GO:0000323 lytic vacuole CC
GO:0002376 immune system process BP
GO:0002495 antigen processing and presentation of peptide antigen via MHC class II BP
GO:0002504 antigen processing and presentation of peptide or polysaccharide antigen via MHC class II BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005102 signaling receptor binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005768 endosome CC
GO:0005773 vacuole CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009987 cellular process BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010558 negative regulation of macromolecule biosynthetic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0012505 endomembrane system CC
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019882 antigen processing and presentation BP
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032446 protein modification by small protein conjugation BP
GO:0036211 protein modification process BP
GO:0042287 MHC protein binding MF
GO:0042289 MHC class II protein binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045346 regulation of MHC class II biosynthetic process BP
GO:0045347 negative regulation of MHC class II biosynthetic process BP
GO:0048002 antigen processing and presentation of peptide antigen BP
GO:0048519 negative regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061630 ubiquitin protein ligase activity MF
GO:0061659 ubiquitin-like protein ligase activity MF
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0097708 intracellular vesicle CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP