Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n8c17185
View in Genome Browser
Position
chr8:3640035-3650915 (+)
10880bp
Gene Type
gene
Gene Description (Protein Product)
Proline transporter
SNARE-complex protein Syntaxin-18 N-terminus
Organism
Populus tremula
Also AS Potri.008G062900Potri.008G063100AT2G39890AT1G51740Potri.008G062900.v4.1Potri.008G063100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19953 RINT-1 / TIP-1 family
Potra2n9c18676 Belongs to the STXBP unc-18 SEC1 family
Potra2n9c18649 Calcium-dependent protein kinase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003333 amino acid transmembrane transport BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005342 organic acid transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006820 monoatomic anion transport BP
GO:0006855 xenobiotic transmembrane transport BP
GO:0006865 amino acid transport BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0008514 organic anion transmembrane transporter activity MF
GO:0009628 response to abiotic stimulus BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015171 amino acid transmembrane transporter activity MF
GO:0015175 neutral L-amino acid transmembrane transporter activity MF
GO:0015179 L-amino acid transmembrane transporter activity MF
GO:0015193 L-proline transmembrane transporter activity MF
GO:0015238 xenobiotic transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015711 organic anion transport BP
GO:0015804 neutral amino acid transport BP
GO:0015807 L-amino acid transport BP
GO:0015824 proline transport BP
GO:0015849 organic acid transport BP
GO:0015893 xenobiotic transport BP
GO:0016020 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0034220 monoatomic ion transmembrane transport BP
GO:0035524 proline transmembrane transport BP
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043090 amino acid import BP
GO:0044464 obsolete cell part CC
GO:0046942 carboxylic acid transport BP
GO:0046943 carboxylic acid transmembrane transporter activity MF
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0080167 response to karrikin BP
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098656 monoatomic anion transmembrane transport BP
GO:1902475 L-alpha-amino acid transmembrane transport BP
GO:1903825 organic acid transmembrane transport BP
GO:1905039 carboxylic acid transmembrane transport BP
GO:0005622 intracellular anatomical structure CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum BP
GO:0012505 endomembrane system CC
GO:0016192 vesicle-mediated transport BP
GO:0031201 SNARE complex CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0098796 membrane protein complex CC
KEGG Term Name Description
map04145 Phagosome Phagocytosis is the process of taking in relatively large particles by a cell, and is a central mechanism in the tissue remodeling, inflammation, and defense against infectious agents. A phagosome is formed when the specific receptors on the phagocyte surface recognize ligands on the particle surface. After formation, nascent phagosomes progressively acquire digestive characteristics. This maturation of phagosomes involves regulated interaction with the other membrane organelles, including recycling endosomes, late endosomes and lysosomes. The fusion of phagosomes and lysosomes releases toxic products that kill most bacteria and degrade them into fragments. However, some bacteria have strategies to escape the bactericidal mechanisms associated with phagocytosis and survive within host phagocytes.
map04130 SNARE interactions in vesicular transport -