PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	Potra2n8c17266 View in Genome Browser
Position	chr8:4261129-4268193 (-) 7064bp
Gene Type	gene
Gene Description (Protein Product)	Sister chromatid cohesion 1 protein
Organism	Populus tremula
Also AS	Potri.008G072300AT5G05490Potri.008G072300.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potra2n9c18752 Structural maintenance of chromosomes protein

Potra2n9c18766 Structural maintenance of chromosomes protein

Potra2n9c18772 Structural maintenance of chromosomes protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000228	nuclear chromosome	CC
GO:0000280	nuclear division	BP
GO:0000793	condensed chromosome	CC
GO:0000794	condensed nuclear chromosome	CC
GO:0000798	cohesin complex	CC
GO:0000819	sister chromatid segregation	BP
GO:0003674	molecular_function	MF
GO:0003682	chromatin binding	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005694	chromosome	CC
GO:0006139	nucleobase-containing compound metabolic process	BP
GO:0006259	DNA metabolic process	BP
GO:0006281	DNA repair	BP
GO:0006302	double-strand break repair	BP
GO:0006323	chromosome organization	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006974	cellular response to DNA damage stimulus	BP
GO:0006996	organelle organization	BP
GO:0007049	cell cycle	BP
GO:0007059	chromosome segregation	BP
GO:0007062	sister chromatid cohesion	BP
GO:0007127	meiosis I	BP
GO:0007135	meiosis II	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008278	cohesin complex	CC
GO:0008608	attachment of spindle microtubules to kinetochore	BP
GO:0009987	cellular process	BP
GO:0010032	meiotic chromosome condensation	BP
GO:0016043	cellular component organization	BP
GO:0022402	cell cycle process	BP
GO:0022414	reproductive process	BP
GO:0030261	chromosome condensation	BP
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0033554	cellular response to stress	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043228	non-membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043232	intracellular non-membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044427	obsolete chromosomal part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044454	obsolete nuclear chromosome part	CC
GO:0044464	obsolete cell part	CC
GO:0045132	meiotic chromosome segregation	BP
GO:0045143	homologous chromosome segregation	BP
GO:0045144	meiotic sister chromatid segregation	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048285	organelle fission	BP
GO:0050896	response to stimulus	BP
GO:0051177	meiotic sister chromatid cohesion	BP
GO:0051276	chromosome organization	BP
GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	BP
GO:0051321	meiotic cell cycle	BP
GO:0051455	monopolar spindle attachment to meiosis I kinetochore	BP
GO:0051716	cellular response to stimulus	BP
GO:0051754	meiotic sister chromatid cohesion, centromeric	BP
GO:0061982	meiosis I cell cycle process	BP
GO:0061983	meiosis II cell cycle process	BP
GO:0070013	intracellular organelle lumen	CC
GO:0070192	chromosome organization involved in meiotic cell cycle	BP
GO:0070601	centromeric sister chromatid cohesion	BP
GO:0071103	DNA conformation change	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090304	nucleic acid metabolic process	BP
GO:0098813	nuclear chromosome segregation	BP
GO:0140013	meiotic nuclear division	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1903046	meiotic cell cycle process	BP