PPGR - Gene Detail

Basic Information

Gene ID	Potra2n8c17865 View in Genome Browser
Position	chr8:8722776-8723396 (-) 620bp
Gene Type	gene
Gene Description (Protein Product)	calcium-binding protein
Organism	Populus tremula
Also AS	Potri.008G134300AT1G24620Potri.008G134300.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Potra2n8c18095 Calmodulin-like protein

Potra2n9c19321 Somatic embryogenesis receptor kinase

Potra2n8c18451 Receptor-like cytosolic serine threonine-protein kinase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005509	calcium ion binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0006950	response to stress	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009266	response to temperature stimulus	BP
GO:0009409	response to cold	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009888	tissue development	BP
GO:0009987	cellular process	BP
GO:0010015	root morphogenesis	BP
GO:0010053	root epidermal cell differentiation	BP
GO:0010054	trichoblast differentiation	BP
GO:0016049	cell growth	BP
GO:0021700	developmental maturation	BP
GO:0022622	root system development	BP
GO:0030154	cell differentiation	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0040007	growth	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0046872	metal ion binding	MF
GO:0048364	root development	BP
GO:0048468	cell development	BP
GO:0048469	cell maturation	BP
GO:0048588	developmental cell growth	BP
GO:0048589	developmental growth	BP
GO:0048731	system development	BP
GO:0048764	trichoblast maturation	BP
GO:0048765	root hair cell differentiation	BP
GO:0048767	root hair elongation	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0050896	response to stimulus	BP
GO:0060560	developmental growth involved in morphogenesis	BP
GO:0071695	anatomical structure maturation	BP
GO:0080147	root hair cell development	BP
GO:0090558	plant epidermis development	BP
GO:0090627	plant epidermal cell differentiation	BP
GO:0099402	plant organ development	BP
GO:1905392	plant organ morphogenesis	BP

KEGG Term	Name	Description
map04626	Plant-pathogen interaction	Plants lack animal-like adaptive immunity mechanisms, and therefore have evolved a specific system with multiple layers against invading pathogens. The primary response includes the perception of pathogens by cell-surface pattern-recognition receptors (PRRs) and is referred to as PAMP-triggered immunity (PTI). Activation of FLS2 and EFR triggers MAPK signaling pathway that activates defense genes for antimictobial compounds. The increase in the cytosolic Ca2+ concentration is also a regulator for production of reactive oxygen species and localized programmed cell death/hypersensitive response. The secondary response is called effector-triggered immunity (ETI). Pathogens can acquire the ability to suppress PTI by directly injecting effector proteins into the plant cell through secretion systems. In addition, pathogens can manipulate plant hormone signaling pathways to evade host immune responses using coronatine toxin. Some plants possess specific intracellular surveillance proteins (R proteins) to monitor the presence of pathogen virulence proteins. This ETI occurs with localized programmed cell death to arrest pathogen growth, resulting in cultivar-specific disease resistance.