Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n9c18857
View in Genome Browser
Position
chr9:1628590-1628927 (-)
337bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the AAA ATPase family
Organism
Populus tremula
Also AS Potri.009G144300AT2G27600Potri.009G144300.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19325
Potra2n9c19325 histone deacetylase
Potra2n9c18915 RNA-binding protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0000902 cell morphogenesis BP
GO:0000904 cell morphogenesis involved in differentiation BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005770 late endosome CC
GO:0005771 multivesicular body CC
GO:0005911 cell-cell junction CC
GO:0006629 lipid metabolic process BP
GO:0006810 transport BP
GO:0006900 vesicle budding from membrane BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007032 endosome organization BP
GO:0007033 vacuole organization BP
GO:0007034 vacuolar transport BP
GO:0008104 protein localization BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008202 steroid metabolic process BP
GO:0009056 catabolic process BP
GO:0009506 plasmodesma CC
GO:0009653 anatomical structure morphogenesis BP
GO:0009888 tissue development BP
GO:0009987 cellular process BP
GO:0010008 endosome membrane CC
GO:0010026 trichome differentiation BP
GO:0010090 trichome morphogenesis BP
GO:0010091 trichome branching BP
GO:0010256 endomembrane system organization BP
GO:0012505 endomembrane system CC
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016125 sterol metabolic process BP
GO:0016192 vesicle-mediated transport BP
GO:0016197 endosomal transport BP
GO:0016236 macroautophagy BP
GO:0016462 pyrophosphatase activity MF
GO:0016787 hydrolase activity MF
GO:0016817 hydrolase activity, acting on acid anhydrides MF
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides MF
GO:0016887 ATP hydrolysis activity MF
GO:0017076 purine nucleotide binding MF
GO:0017111 ribonucleoside triphosphate phosphatase activity MF
GO:0022607 cellular component assembly BP
GO:0030054 cell junction CC
GO:0030154 cell differentiation BP
GO:0030554 adenyl nucleotide binding MF
GO:0031090 organelle membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0032502 developmental process BP
GO:0032507 maintenance of protein location in cell BP
GO:0032509 endosome transport via multivesicular body sorting pathway BP
GO:0032511 late endosome to vacuole transport via multivesicular body sorting pathway BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0032989 cellular component morphogenesis BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033365 protein localization to organelle BP
GO:0034067 protein localization to Golgi apparatus BP
GO:0034613 protein localization BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0036452 ESCRT complex CC
GO:0042592 homeostatic process BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044433 obsolete cytoplasmic vesicle part CC
GO:0044440 obsolete endosomal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045053 protein retention in Golgi apparatus BP
GO:0045185 maintenance of protein location BP
GO:0045324 late endosome to vacuole transport BP
GO:0046907 intracellular transport BP
GO:0046983 protein dimerization activity MF
GO:0048468 cell development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051235 maintenance of location BP
GO:0051259 protein complex oligomerization BP
GO:0051260 protein homooligomerization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051651 maintenance of location in cell BP
GO:0055044 symplast CC
GO:0055065 obsolete metal ion homeostasis BP
GO:0055067 obsolete monovalent inorganic cation homeostasis BP
GO:0055075 potassium ion homeostasis BP
GO:0055078 sodium ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0061024 membrane organization BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0065003 protein-containing complex assembly BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070676 intralumenal vesicle formation BP
GO:0070727 cellular macromolecule localization BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071985 multivesicular body sorting pathway BP
GO:0090558 plant epidermis development BP
GO:0090626 plant epidermis morphogenesis BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098771 inorganic ion homeostasis BP
GO:0098796 membrane protein complex CC
GO:0098805 membrane CC
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901615 organic hydroxy compound metabolic process BP
GO:1902494 catalytic complex CC
GO:1904949 ATPase complex CC
GO:1990621 ESCRT IV complex CC
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.