Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n9c18921
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Position
chr9:2077748-2078769 (+)
1021bp
Gene Type
gene
Gene Description (Protein Product)
NAD+ ADP-ribosyltransferase activity
Organism
Populus tremula
Also AS Potri.009G136501AT4G02390Potri.009G136501.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19777 This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand
Potra2n9c19777
Potra2n9c20065 DNA ligase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0001558 regulation of cell growth BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003909 DNA ligase activity MF
GO:0003910 DNA ligase (ATP) activity MF
GO:0003950 NAD+ ADP-ribosyltransferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005730 nucleolus CC
GO:0005737 cytoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006260 DNA replication BP
GO:0006261 DNA-templated DNA replication BP
GO:0006266 DNA ligation BP
GO:0006271 DNA strand elongation involved in DNA replication BP
GO:0006273 lagging strand elongation BP
GO:0006281 DNA repair BP
GO:0006284 base-excision repair BP
GO:0006464 protein modification process BP
GO:0006471 obsolete protein ADP-ribosylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006915 apoptotic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007166 cell surface receptor signaling pathway BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009987 cellular process BP
GO:0010611 regulation of cardiac muscle hypertrophy BP
GO:0010613 positive regulation of cardiac muscle hypertrophy BP
GO:0010720 positive regulation of cell development BP
GO:0010941 regulation of cell death BP
GO:0012501 programmed cell death BP
GO:0014742 positive regulation of muscle hypertrophy BP
GO:0014743 regulation of muscle hypertrophy BP
GO:0016070 RNA metabolic process BP
GO:0016202 regulation of striated muscle tissue development BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016763 pentosyltransferase activity MF
GO:0016874 ligase activity MF
GO:0016886 ligase activity, forming phosphoric ester bonds MF
GO:0018193 peptidyl-amino acid modification BP
GO:0018209 peptidyl-serine modification BP
GO:0018312 obsolete peptidyl-serine ADP-ribosylation BP
GO:0019538 protein metabolic process BP
GO:0022616 DNA strand elongation BP
GO:0023052 signaling BP
GO:0030307 positive regulation of cell growth BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0033554 cellular response to stress BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0036211 protein modification process BP
GO:0040008 regulation of growth BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043502 regulation of muscle adaptation BP
GO:0044057 regulation of system process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045595 regulation of cell differentiation BP
GO:0045597 positive regulation of cell differentiation BP
GO:0045844 positive regulation of striated muscle tissue development BP
GO:0045927 positive regulation of growth BP
GO:0046483 heterocycle metabolic process BP
GO:0046620 regulation of organ growth BP
GO:0046622 positive regulation of organ growth BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048634 regulation of muscle organ development BP
GO:0048636 positive regulation of muscle organ development BP
GO:0048638 regulation of developmental growth BP
GO:0048639 positive regulation of developmental growth BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051094 positive regulation of developmental process BP
GO:0051103 DNA ligation involved in DNA repair BP
GO:0051128 regulation of cellular component organization BP
GO:0051147 regulation of muscle cell differentiation BP
GO:0051149 positive regulation of muscle cell differentiation BP
GO:0051153 regulation of striated muscle cell differentiation BP
GO:0051155 positive regulation of striated muscle cell differentiation BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051716 cellular response to stimulus BP
GO:0055021 regulation of cardiac muscle tissue growth BP
GO:0055023 positive regulation of cardiac muscle tissue growth BP
GO:0055024 regulation of cardiac muscle tissue development BP
GO:0055025 positive regulation of cardiac muscle tissue development BP
GO:0060284 regulation of cell development BP
GO:0060420 regulation of heart growth BP
GO:0060421 positive regulation of heart growth BP
GO:0060548 negative regulation of cell death BP
GO:0061050 regulation of cell growth involved in cardiac muscle cell development BP
GO:0061051 positive regulation of cell growth involved in cardiac muscle cell development BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0090257 regulation of muscle system process BP
GO:0090304 nucleic acid metabolic process BP
GO:0097190 apoptotic signaling pathway BP
GO:0097191 extrinsic apoptotic signaling pathway BP
GO:0140096 catalytic activity, acting on a protein MF
GO:0140097 catalytic activity, acting on DNA MF
GO:1901214 regulation of neuron death BP
GO:1901215 negative regulation of neuron death BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901861 regulation of muscle tissue development BP
GO:1901863 positive regulation of muscle tissue development BP
GO:1905207 regulation of cardiocyte differentiation BP
GO:1905209 positive regulation of cardiocyte differentiation BP
GO:1990404 NAD+-protein ADP-ribosyltransferase activity MF
GO:2000026 regulation of multicellular organismal development BP
GO:2000725 regulation of cardiac muscle cell differentiation BP
GO:2000727 positive regulation of cardiac muscle cell differentiation BP
KEGG Term Name Description
map03410 Base excision repair Base excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair initiated by lesion-specific DNA glycosylases and completed by either of the two sub-pathways: short-patch BER where only one nucleotide is replaced and long-patch BER where 2-13 nucleotides are replaced. Each sub-pathway of BER relies on the formation of protein complexes that assemble at the site of the DNA lesion and facilitate repair in a coordinated fashion. This process of complex formation appears to provide an increase in specificity and efficiency to the BER pathway, thereby facilitating the maintenance of genome integrity by preventing the accumulation of highly toxic repair intermediates.