Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
Potra2n9c19307
View in Genome Browser
Position
chr9:4719392-4725630 (-)
6238bp
Gene Type
gene
Gene Description (Protein Product)
occurring C-terminal to leucine-rich repeats
Organism
Populus tremula
Also AS Potri.009G092500AT4G34280Potri.009G092500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potra2n9c19617 Notchless protein homolog
Potra2n9c19617 notchless
Potra2n9c19968 serine threonine-protein phosphatase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0000209 protein polyubiquitination BP
GO:0000715 nucleotide-excision repair, DNA damage recognition BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003684 damaged DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006281 DNA repair BP
GO:0006289 nucleotide-excision repair BP
GO:0006293 nucleotide-excision repair, preincision complex stabilization BP
GO:0006294 nucleotide-excision repair, preincision complex assembly BP
GO:0006296 obsolete nucleotide-excision repair, DNA incision, 5'-to lesion BP
GO:0006325 chromatin organization BP
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006513 protein monoubiquitination BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006974 cellular response to DNA damage stimulus BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009987 cellular process BP
GO:0010390 histone monoubiquitination BP
GO:0016043 cellular component organization BP
GO:0016567 protein ubiquitination BP
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016574 histone ubiquitination BP
GO:0016579 protein deubiquitination BP
GO:0019538 protein metabolic process BP
GO:0022607 cellular component assembly BP
GO:0030054 cell junction CC
GO:0031334 positive regulation of protein-containing complex assembly BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0031465 Cul4B-RING E3 ubiquitin ligase complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032446 protein modification by small protein conjugation BP
GO:0032991 protein-containing complex CC
GO:0033522 histone H2A ubiquitination BP
GO:0033554 cellular response to stress BP
GO:0033683 obsolete nucleotide-excision repair, DNA incision BP
GO:0034622 protein-containing complex assembly BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034644 cellular response to UV BP
GO:0035518 histone H2A monoubiquitination BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043254 regulation of protein-containing complex assembly BP
GO:0043412 macromolecule modification BP
GO:0043687 post-translational protein modification BP
GO:0043933 protein-containing complex organization BP
GO:0044085 cellular component biogenesis BP
GO:0044087 regulation of cellular component biogenesis BP
GO:0044089 positive regulation of cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0046483 heterocycle metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051276 chromosome organization BP
GO:0051716 cellular response to stimulus BP
GO:0051865 protein autoubiquitination BP
GO:0065003 protein-containing complex assembly BP
GO:0065004 protein-DNA complex assembly BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0070646 protein modification by small protein removal BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070911 global genome nucleotide-excision repair BP
GO:0070914 UV-damage excision repair BP
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071704 organic substance metabolic process BP
GO:0071824 protein-DNA complex subunit organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:0090304 nucleic acid metabolic process BP
GO:0090305 nucleic acid phosphodiester bond hydrolysis BP
GO:0097159 organic cyclic compound binding MF
GO:0104004 cellular response to environmental stimulus BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC