PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Pathway

Basic Information

Gene ID	Potra2n9c19747 View in Genome Browser
Position	chr9:8280132-8283477 (+) 3345bp
Gene Type	gene
Gene Description (Protein Product)	"SANT SWI3
Organism	Populus tremula
Also AS	Potri.009G044100AT5G58850Potri.009G044100.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Target gene

Potra2n10c20104 RNA splicing

Potra2n10c20109 WD repeat-containing protein

Potra2n10c20111 -

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	MF
GO:0000988	obsolete transcription factor activity, protein binding	MF
GO:0000989	obsolete transcription factor activity, transcription factor binding	MF
GO:0001067	transcription regulatory region nucleic acid binding	MF
GO:0001076	obsolete transcription factor activity, RNA polymerase II transcription factor binding	MF
GO:0001134	obsolete transcription regulator recruiting activity	MF
GO:0001135	obsolete RNA polymerase II transcription regulator recruiting activity	MF
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003677	DNA binding	MF
GO:0003700	DNA-binding transcription factor activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0006355	regulation of DNA-templated transcription	BP
GO:0006357	regulation of transcription by RNA polymerase II	BP
GO:0006935	chemotaxis	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0009553	embryo sac development	BP
GO:0009605	response to external stimulus	BP
GO:0009856	pollination	BP
GO:0009889	regulation of biosynthetic process	BP
GO:0010183	pollen tube guidance	BP
GO:0010468	regulation of gene expression	BP
GO:0010556	regulation of macromolecule biosynthetic process	BP
GO:0019219	regulation of nucleobase-containing compound metabolic process	BP
GO:0019222	regulation of metabolic process	BP
GO:0022414	reproductive process	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031326	regulation of cellular biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0040011	locomotion	BP
GO:0042221	response to chemical	BP
GO:0042330	taxis	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043565	sequence-specific DNA binding	MF
GO:0044212	transcription cis-regulatory region binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0044706	multi-multicellular organism process	BP
GO:0045595	regulation of cell differentiation	BP
GO:0045691	regulation of embryo sac central cell differentiation	BP
GO:0045697	regulation of synergid differentiation	BP
GO:0048229	gametophyte development	BP
GO:0048856	anatomical structure development	BP
GO:0048868	pollen tube development	BP
GO:0050789	regulation of biological process	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0050918	positive chemotaxis	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051252	regulation of RNA metabolic process	BP
GO:0051704	obsolete multi-organism process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0065007	biological regulation	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0140110	transcription regulator activity	MF
GO:1901363	heterocyclic compound binding	MF
GO:1903506	regulation of nucleic acid-templated transcription	BP
GO:2000026	regulation of multicellular organismal development	BP
GO:2000112	regulation of cellular macromolecule biosynthetic process	BP
GO:2001141	regulation of RNA biosynthetic process	BP