Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Potrx001726g00010
View in Genome Browser
Position
Potrx001726:1747-2889 (+)
1142bp
Gene Type
gene
Gene Description (Protein Product)
zinc finger binding to DNA consensus sequence [AT]GATA[AG]
Organism
Populus tremula x Populus tremuloides
Also AS Potri.014G124400AT5G49300Potri.014G124400.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx046469g00010 Periodic tryptophan protein
Potrx064045g00020 Periodic tryptophan protein
Potrx049248g00010 Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes
Regulatory gene
Potrx000106g00010 MADS-box protein
Potrx000589g00010 Agamous-like MADS-box protein
Potrx000925g00010 Dof zinc finger protein
Target gene
Potrx000036g00010 magnesium transporter
Potrx000101g00010 Serine threonine-protein kinase
Potrx000104g00010 Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)