Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx003196g00020
View in Genome Browser
Position
Potrx003196:5777-10364 (+)
4587bp
Gene Type
gene
Gene Description (Protein Product)
transcription factor
Organism
Populus tremula x Populus tremuloides
Also AS Potri.008G011900AT3G54320Potri.008G011900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx063976g00020 Belongs to the cullin family
Potrx065594g00010 Belongs to the cullin family
Potrx054568g00040 BTB POZ and MATH domain-containing protein
Regulatory gene
Potrx000128g00010 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000718g00010 B3 DNA binding domain
Target gene
Potrx000018g00010 -
Potrx000036g00010 magnesium transporter
Potrx000040g00010 Serine threonine-protein phosphatase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005488 binding MF
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006110 regulation of glycolytic process BP
GO:0006140 regulation of nucleotide metabolic process BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006629 lipid metabolic process BP
GO:0006638 neutral lipid metabolic process BP
GO:0006639 acylglycerol metabolic process BP
GO:0006641 triglyceride metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008610 lipid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009889 regulation of biosynthetic process BP
GO:0009891 positive regulation of biosynthetic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010557 positive regulation of macromolecule biosynthetic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019432 triglyceride biosynthetic process BP
GO:0030808 regulation of nucleotide biosynthetic process BP
GO:0030811 regulation of nucleotide catabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0034285 response to disaccharide BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0043467 regulation of generation of precursor metabolites and energy BP
GO:0043470 regulation of carbohydrate catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0045017 glycerolipid biosynthetic process BP
GO:0046460 neutral lipid biosynthetic process BP
GO:0046463 acylglycerol biosynthetic process BP
GO:0046486 glycerolipid metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051193 obsolete regulation of cofactor metabolic process BP
GO:0051196 obsolete regulation of coenzyme metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0062012 regulation of small molecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0097159 organic cyclic compound binding MF
GO:0140110 transcription regulator activity MF
GO:1900371 regulation of purine nucleotide biosynthetic process BP
GO:1900542 regulation of purine nucleotide metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901576 organic substance biosynthetic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1901957 regulation of cutin biosynthetic process BP
GO:1901959 positive regulation of cutin biosynthetic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903578 regulation of ATP metabolic process BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP
GO:2001169 regulation of ATP biosynthetic process BP