Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Potrx003399g00030
View in Genome Browser
Position
Potrx003399:16623-18919 (-)
2296bp
Gene Type
gene
Gene Description (Protein Product)
GAGA binding protein-like family
Organism
Populus tremula x Populus tremuloides
Also AS Potri.001G133900AT2G35550Potri.001G133900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx064515g00010 Zinc-finger homeodomain protein
Potrx063150g00010 Zinc-finger homeodomain protein
Potrx064372g00010 B3 domain-containing transcription factor
Regulatory gene
Potrx000106g00010 MADS-box protein
Potrx000259g00020 B3 domain-containing transcription factor
Potrx000589g00010 Agamous-like MADS-box protein
Target gene
Potrx000006g00010 Cytochrome p450
Potrx000008g00010 Belongs to the mitochondrial carrier (TC 2.A.29) family
Potrx000020g00030 Polypyrimidine tract-binding protein homolog

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0010033 response to organic substance BP
GO:0042221 response to chemical BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043565 sequence-specific DNA binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0097159 organic cyclic compound binding MF
GO:1901363 heterocyclic compound binding MF