Basic Information
Gene ID
Potrx005309g00010
Position
Potrx005309:2088-13795 (+)
11707bp
Gene Type
gene
Gene Description (Protein Product)
PGAP1-like protein
Organism
Also AS Potri.001G338000AT3G27325Potri.001G338000.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx009248g00010 Glycosylphosphatidylinositol anchor attachment 1
Potrx010534g00030 GPI transamidase component
Potrx048130g00020 Peptidase C13 family
Regulatory gene
Potrx000515g00010 Myb-like DNA-binding domain
Potrx000925g00010 Dof zinc finger protein
Potrx001114g00010 MYB-CC type transfactor, LHEQLE motif

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00563 Glycosylphosphatidylinositol(GPI)-anchor biosynthesis Cell surface proteins can be attached to the cell membrane via the glycolipid structure called glycosylphosphatidylinositol (GPI) anchor. Hundreds of GPI-anchored proteins have been identified in many eukaryotes ranging from protozoa and fungi to mammals. All protein-linked GPI anchors share a common core structure, characterized by the substructure Man (a1-4) GlcN (a1-6) myo-inositol-1P-lipid. Biosynthesis of GPI anchors proceeds in three stages: (i) preassembly of a GPI precursor in the ER membrane, (ii) attachment of the GPI to the C-terminus of a newly synthesized protein in the lumen of the ER, and (iii) lipid remodeling and/or carbohydrate side-chain modifications in the ER and the Golgi. Defects of GPI anchor biosynthesis gene result in a genetic disorder, paroxysmal nocturnal hemoglobinuria.