Basic Information
Gene ID
Potrx006818g00010
Position
Potrx006818:1144-3204 (+)
2060bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the small GTPase superfamily. Arf family
Organism
Also AS Potri.005G142100AT1G10630Potri.005G142100.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Potrx060385g00010 ADP-ribosylation factor GTPase-activating protein
Potrx061031g00010 Belongs to the small GTPase superfamily. Arf family
Potrx059721g00020 Belongs to the small GTPase superfamily. Arf family
Regulatory gene
Potrx000106g00010 MADS-box protein
Potrx000341g00010 NAC domain-containing protein
Potrx000403g00010 NAC domain protein, IPR003441 source

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04144 Endocytosis Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.