PPGR - Gene Detail

Gene ID	Potrx009948g00010 View in Genome Browser
Position	Potrx009948:6338-10820 (+) 4482bp
Gene Type	gene
Gene Description (Protein Product)	ER lumen
Organism	Populus tremula x Populus tremuloides
Also AS	Potri.011G071200AT1G29330Potri.011G071200.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	Potrx065485g00010 Transmembrane emp24 domain-containing protein Potrx055355g00020 Transmembrane emp24 domain-containing protein Potrx046078g00010 Transmembrane emp24 domain-containing protein
Regulatory gene	Potrx000441g00010 Trihelix transcription factor Potrx000441g00020 Trihelix transcription factor Potrx000925g00010 Dof zinc finger protein

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005789	endoplasmic reticulum membrane	CC
GO:0005794	Golgi apparatus	CC
GO:0005801	cis-Golgi network	CC
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0031984	organelle subcompartment	CC
GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044431	obsolete Golgi apparatus part	CC
GO:0044432	obsolete endoplasmic reticulum part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0098827	endoplasmic reticulum subcompartment	CC